rs46831531 SNP Detail

Summary

• ID
  rs46831531
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:51361860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAGGAAG CTTCCAGACT
  CCCCAAGTTC TACAGGCCAC AGCAGAAATG ATATAATGTG ATAAAGTTCC AAAAGGATCT
  CTCTGGCTGA AGGAGATACT GGATGGAACC AGGAGTCACT TTATCCACCT CATTGTCTCC
  TTGCTGCAGA ACCCACAAAA TGAAGACCCC CCCAGGGAAT TGTGTACGCC CAGGTAAAAT
  M
  CTCCAGGCTT CGGAAGGTAG GAATTAATGT TTCCCCACTG TCAGGAACCT TTCTTCTCAC
  GTTCATTCCA GCCCCATAAG TTACTAACAC TAAACACCTT CTTCCAACTC TATCCAACCC
  CAGGACACTG CATGCAAAGA GACCCAGGAT GTAACCTATG CCCAGTTGTG CATCAGGACA
  CAGGAACAGA ACAACAGCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52288971	NES15304845	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46831531					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52288971	NES15304845	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:51361860 () rs orientation: forward

Symbol	Name	Function Class
Gm49339	predicted gene, 49339	within coordinates
Lilrb4b	leukocyte immunoglobulin-like receptor, subfamily B, member 4B	within coordinates
Tssr93249	transcription start site region 93249	1909 bp downstream
Tssr93250	transcription start site region 93250	1448 bp downstream
Tssr93251	transcription start site region 93251	1387 bp downstream
Tssr93252	transcription start site region 93252	1292 bp downstream
Tssr93253	transcription start site region 93253	1096 bp downstream
Tssr93254	transcription start site region 93254	963 bp downstream
Tssr93255	transcription start site region 93255	745 bp downstream
Tssr93256	transcription start site region 93256	642 bp downstream
Tssr93257	transcription start site region 93257	257 bp downstream
Tssr93258	transcription start site region 93258	17 bp downstream
Tssr93259	transcription start site region 93259	2 bp downstream
Tssr97554	transcription start site region 97554	within coordinates
Tssr97555	transcription start site region 97555	547 bp downstream