rs46836867 SNP Detail

Summary

• ID
  rs46836867
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:19282085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AATGGACAAA GTGATAAAAG TGCTTTGTAT TACAATGACA
  AAAGAAAAGA GTCCTCATTG TATCCTTATG AGGATACCTC ATTCCTTCCA TCCAAATTTA
  S
  TGAGTGGCCG TTTGTTATAT CCACCCATAG TGCCTCTCTT CCTGTTTGCG TAGAAGAATC
  GTGTCCTGTC TTTGCTTTTA TTGGGCTGGG GGTGGGGTGG G                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146316364	ENSMUSSNP722674	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46836867					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:19282085 () rs orientation: forward

Symbol	Name	Function Class
Armc3	armadillo repeat containing 3	Intron
Rr396792	regulatory region 396792	585 bp downstream
Rr552447	regulatory region 552447	492 bp distal
Rr552448	regulatory region 552448	796 bp distal