rs46842266 SNP Detail

Summary

• ID
  rs46842266
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30256613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCCTACTC ACTGGATCTC TGAGGACCCC CCTCAGCGAG
  CCCATCGTCC ATCTCCCTCC TCTTCTTCCT CCGCTGGTGG GGGAAGCGGG CAGATGGCCT
  R
  TGTGGTTAAG GTGAGTGTCA GGCCCGGAGC TGGGGACTGG GAACCTTTTA GTGAGCTGGG
  GTCCCAGCCA CCTTACCTTT TGCCTGTGGC AGCAATGGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148682460	ENSMUSSNP3473225	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss322135252	CHEV_7_31342207	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46842266					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30256613 () rs orientation: forward

Symbol	Name	Function Class
Hspb6	heat shock protein, alpha-crystallin-related, B6	1745 bp downstream
Lin37	lin-37 DREAM MuvB core complex component	within coordinates
Tssr71791	transcription start site region 71791	1554 bp downstream
Tssr71792	transcription start site region 71792	1585 bp downstream