rs46843137 SNP Detail

Summary

• ID
  rs46843137
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:46341399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACAC ACACACACAC
  AGTCACACAC CAGCTTCATT CTCACCAATT CCCCATTCAC TGTTATTTTA GTTACAGGTC
  TGTCAAGCAG ACATACCATA TTCTTTTAAG TCTACATGCC TTTGATTGTT CTGTGCCTTC
  CCGTGAACTG CGGGCACCTT CTGATCCTTA AGACAAACTT TTGTTCATCC TCGGAGACTC
  R
  GTTCTGGATT CATCTCTCTC TTATGCATCC CGTCTGACCA AATAAGGTTG TGACTTATGC
  TTGACCCACA CTGTTCTCTG GCTCCCTCTG TGTTTATCTC TAATTATGTC TCTGACATAT
  TTACATATTC TCTTACTCCA TAAAATTGTG AGCTTCATGA AGATGGGAAG TCGGAGGACA
  AGCATCAGCC TAATTAACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61787373	NES17721020	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46843137					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61787373	NES17721020	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:46341399 () rs orientation: forward

Symbol	Name	Function Class
Gm10113	predicted gene 10113	within coordinates
Rr272082	regulatory region 272082	802 bp proximal
Rr276190	regulatory region 276190	402 bp proximal