rs46844341 SNP Detail

Summary

• ID
  rs46844341
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149418839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGCGGTA TACAGTAAAC
  ACGAAGCATT ACTGTGCTGC AGAGCTGCCC AGATGTCAGG CATGGTAGCA CACATCAATG
  TACTCAAGAG GAGAGTTTGA GATCAGGAGT TCAAAGGCTA GCCTAGTCTA CACGAGACAT
  TATGGCAAAA GACCTGGGAA GAAAGATGCT CAGAGACCAT GGAGGGGAGG AACCCTTTCC
  C
  TTTTCTCTGC AAAAGTCTCC GGCTGGACTA AGGGTTGAGC CTAGAACTTT GCAAGTTCAG
  GTGCTCTACC GCTGAACTAT ACTCCTAGCT CAATTTTGTT TTCATGGATG GTCTCAGTTA
  AGTCCAGGTT AGCCTTGAAC TTGTGACCAA CCTGTTTCCA GCCCCCTGAG TATTTGGGAT
  ACAGGCTTGT GCCACCAGGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148031494	ENSMUSSNP4706875	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs46844341					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149418839 () rs orientation: forward

Symbol	Name	Function Class
Tssr40324	transcription start site region 40324	268 bp upstream
Ube4b	ubiquitination factor E4B	within coordinates
Ube4bos2	ubiquitination factor E4B, opposite strand 2	257 bp upstream
Ube4bos3	ubiquitination factor E4B, opposite strand 3	257 bp upstream