rs46846337 SNP Detail

Summary

• ID
  rs46846337
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:117496599 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGTCCTTG ATGGAGGACC
  AGCAAACGGG CTATTTTGAG AGCACCGTCA GTCTTCTAGA CCTGGGGAAA AGTCCTCCCA
  GCGGTCTGTG GAAGTCAGTG GGGGCCCTCT GACATCCTCA GACACAAAGG ATCCGTGCCA
  GGCCACAGCT GCTTCCGGTC CTGCTCCTGG GTCCAGACCG AGCGAGGCAT TCTCTCCCTC
  S
  GGCCAGCATT TCCTCTGCAG AGAGACTGCT CCCAACAAAC TGCAAAAGGA GTCGCCTGCA
  CCCAGTTCTC TATGCGCTCC GCATCGTTGT ACCCGGTACA TTATTGTTAT AAAAGAATAA
  CACAAGGCCA ACATTCACTT ACTATAAAGG TTTCTCGCCA CTGATTTCCT GTTAGCCTTT
  CTCCTTCTCA ACTTGCTGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss61234275	NES16850628	PERLEGEN	MM_PANEL2	f	SNP	C	C	G	C	C	C	C	C	C	C		C	C	C		C
ss323214891	CHEV_9_117576649	CHEVERUD	SCREENING_POP	f	SNP											G				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs46846337					SNP	C	C	G	C	C	C	C	C	C	C	G	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61234275	NES16850628	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:117496599 () rs orientation: forward

Symbol	Name	Function Class
Rbms3	RNA binding motif, single stranded interacting protein	within coordinates
Rr193213	regulatory region 193213	602 bp proximal