rs46854871 SNP Detail

Summary

• ID
  rs46854871
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70928118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACATCCCC AGCTCGCAAA
  CAGTTGCTTA ATCATCTTTG TGTATAGTAG TGTCCCCCAT TACTTATACA ATAGATTATG
  CTCCCAAACT CAACAGTGTC TGAATCACTA GGTGGGGCTG AGAGGCTCAA AAGTGCACAA
  GCCATAGGGA GTTAGCTCAG TGGTAAACCT GCACTGGTCC AGTTCTGGGT TCTAACTTCA
  A
  TCCATAGTTC TAGAAACAGA AGGAAGCAAA GACAGAGCAT AAAAGCATCT TTCCTGGGTG
  GGTCCAGGGC ATCAGTATTT TAACCTTCTT CCTGATTCCA CAAAGGGAGC TGAAGCACTG
  ATTGGCAAAT TCATCAGCTC TGGCTAGGAG GAGTCAACCA AATCAAGTGT AGAGTTAGGA
  TGAACCATAA CATTCCATCT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133273544	ENSMUSSNP678005	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46854871					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70928118 () rs orientation: forward

Symbol	Name	Function Class
Gm66475	predicted gene, 66475	241 bp upstream
Gm66915	predicted gene, 66915	within coordinates
Tssr61339	transcription start site region 61339	160 bp downstream