rs46855328 SNP Detail

Summary

• ID
  rs46855328
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:23515663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGTTAAC TGAGAGAACT
  GAAACATCCG GGTGTGGAGG AGATGTGGGG AGCCTGAGAA AGAGCAGAGG CTTCAACCAT
  GTGGTTATAC TCAGGCCATC AAATCCAGAA TAAAAACTCA GGAAGTGAAT GGGATGCCCC
  CTCCCTCATG GGCTTCATGC TCAGCCTGAG ATCATAAGTT ACCCTCCTTG GAAGGAGCTG
  Y
  TTCTGTCTGC CTCTGTATGT CAGGTGTTAG CTACGCAGAG CTTTGTGGAA AAAATAGTTT
  ACCTAAAGGT ATAAGAGTTC TACCTATTTT TTTTAAAGAA ACATTTTTTT TGTTAAAGCA
  TTTTTTGTTA TTTAATACAT TTTATCAGTT CTTGGAGAAT TTCATGTAAT ATAATTTTAC
  CATAGTCAAG CCCCTTCTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62140057	NES17177126	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46855328					SNP	C	C	T	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62140057	NES17177126	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:23515663 () rs orientation: forward

Symbol	Name	Function Class
Kcnma1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	within coordinates
Tssr127715	transcription start site region 127715	1461 bp upstream