rs46855365 SNP Detail

Summary

• ID
  rs46855365
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83174172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CTGACTCTGT CATTCTCTCA GAGTGTGCTG GGCCTCACGG
  CCTCACCCAC TGTTGCTCTC CTTCACATGT CTGCTCAACC CCCCAAAGTC AGAGGTGGGG
  T
  TTTGGGAAGT TTTGGTGGTG AGGAGAAGGG TCTTCTGCGT GTTGTGCCCA GAGTCCCTCT
  GCTTTGTCCA GTGTCCCCTC ATTGTCTAAT CGCTCTCTCT C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133346965	ENSMUSSNP4828973	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs46855365					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83174172 () rs orientation: forward

Symbol	Name	Function Class
Dctn1	dynactin 1	within coordinates
Tssr57329	transcription start site region 57329	1365 bp downstream
Tssr57330	transcription start site region 57330	1341 bp downstream
Tssr57331	transcription start site region 57331	1309 bp downstream
Tssr57332	transcription start site region 57332	1233 bp downstream
Tssr57333	transcription start site region 57333	1213 bp downstream
Tssr57334	transcription start site region 57334	1174 bp downstream
Tssr57335	transcription start site region 57335	1156 bp downstream