rs46856616 SNP Detail

Summary

• ID
  rs46856616
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63693718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGC ACACCCTACC TTCAGGAGAG
  K
  GGCCTCTCTC AAATCTCCTC TGGCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322983820	CHEV_9_63634243	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46856616					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63693718 () rs orientation: forward

Symbol	Name	Function Class
D9Mit31	DNA segment, Chr 9, Massachusetts Institute of Technology 31	1997 bp distal
D9Mit245	DNA segment, Chr 9, Massachusetts Institute of Technology 245	1345 bp distal
Gm68073	predicted gene, 68073	within coordinates
Rr2246	regulatory region 2246	1995 bp proximal
Rr2254	regulatory region 2254	within coordinates