rs46856976 SNP Detail

Summary

• ID
  rs46856976
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57803663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGT CCTGAATCCT GCTTGGCCTT
  C
  GGCCTCCCCT CCTATCTCTG CTCAA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss132183696	ENSMUSSNP4203407	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss323686467	CHEV_11_57726339	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs46856976					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57803663 () rs orientation: forward

Symbol	Name	Function Class
D11Mit143	DNA segment, Chr 11, Massachusetts Institute of Technology 143	1900 bp proximal
Gm33078	predicted gene, 33078	within coordinates
Gm73794	predicted gene, 73794	1545 bp downstream
Rr234828	regulatory region 234828	338 bp proximal
Rr244432	regulatory region 244432	891 bp distal
Rr244433	regulatory region 244433	554 bp distal
Rr250602	regulatory region 250602	139 bp proximal