rs46857583 SNP Detail

Summary

• ID
  rs46857583
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40547584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGGAAGGA CCCTTCCCTG
  CATTCTGAGG TCTACCAAGG CTGTCGTCAG GGTCTATTCT AAGCCATGCC AATGTCTGCT
  CAGAGATCAT CAGTGACTTG AGGCTGGAAA GAAGGCTCAG CAGCCAAGAG CACTTGCTGC
  TCTCTCGGAG GACCTGGCTT TGGTTCTCAG CACCCACATG GTGGCTCACA TGACCATTGT
  R
  ACTCTAGTTC CTTGGGATTC AAAGCCCTCT TCTGGACCCC CTAGGCACTG GGAACACATA
  TGGAGCATAG GCATGCACAC AGGCAAATAC TCATATACAT AAAATATAAA TTAACCACCC
  ATATAAACCA TCAGTGACTC CCTGTGCCGA TAGTAGATCC AAACTCCTCA GCCGCCTGTT
  TTTCAAACCA ACTGTGATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147068162	ENSMUSSNP3871674	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46857583					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40547584 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	within coordinates
Tssr93028	transcription start site region 93028	1481 bp upstream