rs46858574 SNP Detail

Summary

• ID
  rs46858574
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:37562006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C GAGCCTAGGA GAGGCCGGCT CCCGAGGCGA GGGTGTACTT
  CCAAGTAACC CGGTTCATCA TGGAGGCAGG CGTCAAGCTA GGCATGCAGT CAATCCCCAT
  C
  GCTACCGCGT GCACCATTTA CTGTAAGTTC TTCTGCAAGA TCAACCTGGA TGCATATGAC
  CTCTACCTGG TCGCCATGTC TTCCATTTAC TTGGCCTGCA A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss144490034	ENSMUSSNP3397767	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46858574					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:37562006 () rs orientation: forward

Symbol	Name	Function Class
Ccnq-ps4	cyclin Q, pseudogene 4	within coordinates
Gm18267	predicted gene, 18267	384 bp downstream
Gm64931	predicted gene, 64931	116 bp upstream