rs46868591 SNP Detail

Summary

• ID
  rs46868591
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70349339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAATTGG ATGTAACAAC
  GAATGAATCA GAAATGATAA AGGTAAGGGA GCAATTACAT CAATTAAATA ATATAACAGT
  CTTTTCAGTT TGTACCCAAA ACTGGTCATC AGTAAAGAGA CTAAATCAAT TTTAAATATT
  AATGATAATT GTTTGAGAAT CTCCATTTGG TAAACAGGAA GGAGTCACTG GAACACATGG
  R
  TAAGACAGAA ATTTCTGGCA GATTGATTGT GAAAGACCCA ACAAAGATAG CAGAGCTCAT
  GATGTGTCTC CTACAAGGAC ATCAGTGACA GAATGGTGAC TGTCACTCGC TCCAAGAGCA
  TGAGATAAAC CACTCTACAA AAAATCTTGC ACTATGCACT GGAGTCTTAC AGTTTATTTA
  CAAAAGAAAT GTGGGATTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139680848	ENSMUSSNP1398655	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46868591					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70349339 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494844	regulatory region 494844			786 bp distal
Rr494845	regulatory region 494845			804 bp distal