rs46872862 SNP Detail

Summary

• ID
  rs46872862
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68842320 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAGTGGACT CTAGAATTAC TGATTCTGGA ATTCGGGCCT
  TGAGATACAG AATGGAAAAA ACTGTCAGAA GCAAGGGGTG TTGGCAATGG ATGCAAGGAC
  R
  CAAATATAAC AAAGGGGAAT GCTACCACGA TAATAGAGGA GCATGCACCT TAGCAGTGGT
  AAAGCCACTT AGCTCGTTAG AGTGATTGCA GCTTCATGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss62443520	NES17255027	PERLEGEN	MM_PANEL2	f	SNP		A	A	A		A	A	A	G
ss139661427	ENSMUSSNP902646	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs46872862					SNP	G	A	A	A	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62443520	NES17255027	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68842320 () rs orientation: forward

Symbol	Name	Function Class
Adam28	a disintegrin and metallopeptidase domain 28	1156 bp downstream
Rr293303	regulatory region 293303	81 bp proximal
Tssr129435	transcription start site region 129435	1599 bp downstream