rs46875391 SNP Detail

Summary

• ID
  rs46875391
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50595352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACC ACCTGTAAGA CCAGTTCTGG
  R
  GGACCTGACA CCCTCTTGTG GTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135164074	ENSMUSSNP1971242	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320758978	CHEV_3_50444825	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46875391					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50595352 () rs orientation: forward

Symbol	Name	Function Class
Rr576165	regulatory region 576165	567 bp distal
Rr576166	regulatory region 576166	5 bp proximal