rs46876196 SNP Detail

Summary

• ID
  rs46876196
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:56530393 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T TAGTGCAGAG TTCTATCAGA CCTTCAAAGA AGATCTAATT
  CCAGTTCTTC ACAAACTATT CCACAAAATA GAAGTAGAAG GTACTCTACC CAACTCATTC
  Y
  ATGAAGCCAC AATTACTCTG ATACCTAAAC CACAGAAAGA TCCAACAAAG TTAGAGAACT
  TCAGACCAAT TTCCCTTATG AATATCAAAG CAACGGTACT C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139834260	ENSMUSSNP6858796	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46876196					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:56530393 () rs orientation: reverse

Symbol	Name	Function Class
Gm9795	predicted pseudogene 9795	1897 bp upstream
Gm66844	predicted gene, 66844	1630 bp downstream
Tssr93379	transcription start site region 93379	1628 bp upstream