rs46877250 SNP Detail

Summary

• ID
  rs46877250
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46459521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGGGTTTC GTGAGGAAGC
  ATTAAGTTAA GGAAAATACA ACCACCATAC AAACTATGAT TCTCCTAAGC CTTTGAATAG
  CAAGGACGGT AGGAAAGCTG GAGGAAACCA AAATATAAGC AATGGGAATA GTCAGAGAGC
  AGTGATAGGG CTCAGCAAGT TAAGGGGCTT GCGGCACAAG CCTGGCAACC TGAACCTGAA
  M
  CCCAGAACCC AAGTAAAGGC ACGAAAGAAT GGCTCCACAA AATTCTCCTC TGACCATCCC
  AGGTGCACTG TGGCACATGT ATCCAAACAT GCGTGCACAC ATGGCACACA CGCAGCAATT
  AAAAATACAT ATAGCCTAAG ACTTGGCAGC ATAGAAGAAG CAGTTTCTTT GTCGTTATGC
  TGGAGTGTAA AGAATGGGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss145697435	ENSMUSSNP4116785	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs46877250					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46459521 () rs orientation: forward

Symbol	Name	Function Class
Mad2l1bp	MAD2L1 binding protein	within coordinates
Rr341809	regulatory region 341809	within coordinates
Rr341810	regulatory region 341810	1880 bp proximal