rs46878846 SNP Detail

Summary

• ID
  rs46878846
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:31122140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTTCCT AAGAGTCTAA
  CTTGCTCCAA TTGTTCAGAA TGCAAACCAG CAGAGGACCT GAAGAATTTT TGTCTCCATC
  TGTAAGCTGA AAACAAGACT GAAAAGACCA ATGGAGGTTC TCCTAATCTT CTTCGAGTAT
  CAGTCCAGCA TCTGGAGAAT GATTCCTGAC CAATAGAAGG GGTGGTCAGA GCAACCCAAA
  S
  CCCCAGGACT GGTTAACAGT GTGAGACTTC AAAATAGATG TTATGAATAT GTTCAAGTAT
  CTTTAATAAG AAATAAATGG CTCCATTAAC AAAATCTATG AAGACAAAAA CAAACTAGTA
  TGAAATGAGG GAAACAGTTC AAGATATAAA AGTAGAGATA AAATCACTAA AGAAAACCAA
  AACTAAGGTT AAATTTGTAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss61267513	NES16887549	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G	C	C	C	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs46878846					SNP	C	C	C	C	C	G	C	C	C	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61267513	NES16887549	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:31122140 () rs orientation: forward

Symbol	Name	Function Class
Gm63653	predicted gene, 63653	1879 bp upstream