rs46883778 SNP Detail

Summary

• ID
  rs46883778
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117912801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGAGGGGACC GGATGATGTT GATTCTTGTC TTAGTCAGGG
  TTTCTATTCC TGCACAAACA TCATGACCAA GAAGCAAGTT GGGGAGGAAA GGGTTTATTC
  R
  GCGTACACTT CCATGCTGCT GTTCATCACC AAAGGAAGTC AGGACTGGAA CTCAAACAGG
  TCAGGAAGCA GGAGCTGATG CAGAAGCCAT GGAGGGATGT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147298660	ENSMUSSNP6489170	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46883778					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117912801 () rs orientation: forward

Symbol	Name	Function Class
Gm70335	predicted gene, 70335	1934 bp upstream
St3gal3	ST3 beta-galactoside alpha-2,3-sialyltransferase 3	within coordinates
Tssr43029	transcription start site region 43029	849 bp upstream