rs46884111 SNP Detail

Summary

• ID
  rs46884111
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68832195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGAGACA GGAAGGGAGG
  TGGACATCAG GGGTCTCCAT TTCCTCCCTT ACTCTTGGCA ATGCATAGTT AATGATAGAA
  GGGATGGATG GTGGATGTCC TAAGGTATCT GTTAGATTGC CTTTCCAAAT GGCTGTGATC
  TGAGCGTGGT TCATGATAAG GAGATGCTGA CTGCACTTAC AGAGTGTCCA TAGACCACCA
  R
  AGTGAGAATG TAAGCAAAAG ATATAGACAT GTCTCTGGCT TTATAAAACA GTAAGGGCAT
  CCTGGAAAAC TTCAGGTTTC AGAGCAGGAA GAGCCAACTC CTTCTGATAC ACCGTGTGTT
  CTAGCTCTCT GGTCATGCTT TGCTTCTGTG GTTTTCCTGT CTCTCATCAT GGCTTCTTCT
  TCTTCTTCTT CTTCTTCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss62443634	NES17255368	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs46884111					SNP	G	G	G	G	G	G	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62443634	NES17255368	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68832195 () rs orientation: forward

Symbol	Name	Function Class
Rr296117	regulatory region 296117	901 bp distal
Tssr126359	transcription start site region 126359	448 bp downstream