rs46896685 SNP Detail

Summary

• ID
  rs46896685
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84210271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGACACA GCTCTTTCTG
  CCTGTGAAGA GTTTACAGTC ATGCGTGTGG GCAGGATGTG TGTATCAGGC AATGTGGTTG
  CATATAGCAA ATTTTTGTGG TTAGCAAGGA GGGGAGAACC TAGTTTAGCC TAAAAGGTTC
  CCCAGAGAGG CCTCTGGGAA GGTGATACGG GACAAGCTGT CACCTTGACG GGTAGTGAGT
  R
  CTGCAAGGTT TATAAAGCAG CAGGGTCAAG GAATGGAGGT GAAGTGAGAG GGCTCTGAAG
  CAGCTGGCTG GATCCAGATG TGAAGGGGAC AGAGTTGGGC TGGGGTGACA AGGGAGGGGA
  GCTACAGGTA CCTGATGACA GGGTTTTGGG GTGTCATCAG AGAGAAAGAG AGAGAGGCAG
  ACAGAGGGAG AGAGACAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146124364	ENSMUSSNP2732399	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46896685					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84210271 () rs orientation: forward

Symbol	Name	Function Class
Rr405491	regulatory region 405491	650 bp upstream