rs46897902 SNP Detail

Summary

• ID
  rs46897902
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41498147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGTCGTAGCC CCATACCGAG TCGCGGTCCA CTAGACGGAA
  GAAGCAGGAG ATGTTCTGTG ACTGGTACCC CACGCGGACC TCGGCTAGCG AGAAGAAGGG
  M
  TCCGCCATCT CGGTGTACCG CCTGCTCCAC ACACTGGGGT CAGACAGAGG CCTGTAGGTG
  CTGAAGTCCC TGGGCAGGTA GCTGACCTCA CCCGCGTCGA A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146219238	ENSMUSSNP5154184	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46897902					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41498147 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14157	CpG island 14157	within coordinates
Myorg	myogenesis regulating glycosidase (putative)	within coordinates
Tssr41339	transcription start site region 41339	1814 bp upstream
Tssr41340	transcription start site region 41340	74 bp downstream