rs46899111 SNP Detail

Summary

• ID
  rs46899111
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34875103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAGAGCC CCGTCCTGCC
  CCAGGCACCA CAGGAAGTAC AAGTGGCTAA GTCCCTCATT GAGTCAGATG GGCAGAAATC
  ACCTTTGTTA AGTTTCTGTC CATTTCCAGT AGGTGTTTTT GCTTGGGTTC CACCAGGTGT
  TAGGCTGGTG ACAAGAAAGA CTATTAAGGA AGAACACCTG GGTAGTGTGT GAGCTGATGA
  G
  CATGTCTCAT AGTTTGTAAG TGGACTCTGA TAATGGTGAG TGGGATCCTG GGAAATGTCT
  AACATAGTAT ACACATTGGG ATGCACGAAG CAAGTCATTA GTGTCGTGTC ATCTTATTTT
  CAGTCTTATA ATTTATACAT AATTATACAA TATGCTTTTC ATAAGGATCC AACAGAACTG
  AACCAACATC ACTTCAAGGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147562886	ENSMUSSNP4122768	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46899111					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34875103 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	542 bp downstream
Tssr133982	transcription start site region 133982	1253 bp downstream
Tssr133983	transcription start site region 133983	1373 bp downstream