rs46909317 SNP Detail

Summary

• ID
  rs46909317
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35947869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTACT GGAGGGTTTC TGGGGGGATG
  C
  CGTATGTGGA TAAGAAGCTG GAAAA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss149156815	ENSMUSSNP6329675	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322587386	CHEV_8_36543769	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46909317					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35947869 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	1179 bp distal
Rr662195	regulatory region 662195	1276 bp distal
Rr662196	regulatory region 662196	1181 bp distal
Rr662197	regulatory region 662197	1020 bp distal
Tssr80937	transcription start site region 80937	151 bp upstream