rs46944175 SNP Detail

Summary

• ID
  rs46944175
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74593600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGGGGTGT TAATTCTGGA
  TTTGTTTTGT TTTGTTTTGT TTCCCCTTTT GTGGTGGTAT CTATCTCTGT TCTAAGTATA
  AGAACTGTAA ACCAGAAGCC CTAGAGGAAG GCTCGATTAA CCCGTTTAAT TTTTGTAACA
  TAAACATTGC ACATTCACAT CTCCTTGAGA AGTACATTGC ACCTCTTATG TGGTTCTAAA
  M
  TTTGTTATGC CAAGTAGTGG CAGTGGGCTA CCTCATTTTT AAACTCCCCT CAGGCTCTGG
  CCAAGTGGTG CAGGTGACAC TTAAAGGCTG TCTGAGAATA TTTTTTTCTT AGCAACAAGA
  AGAGACTTTT ACATGCTACC ACATTCTCTA CATTTATTAG CTAGAATTAT TCTCTAAAGA
  ACACCTTTAT ACATAATAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	NOD/ShiLtJ	NZW/LacJ
ss52506929	NES15580634	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	NOD/ShiLtJ	NZW/LacJ
rs46944175					SNP	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52506929	NES15580634	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74593600 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	within coordinates
Gm49171	predicted gene, 49171	within coordinates