rs46946048 SNP Detail

Summary

• ID
  rs46946048
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127545133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGGTAGAG CATAGGAGAC AGCAAAGAGG TACCAGAGGA
  GTCAAGGGCC TGGGCAGGCA TCGATGGTGC TCCAGAGAAG ACTCGTTTTT GTTTTGTTTT
  Y
  GAGAAAGGGT TTCTCTATGT AGCCCAAGCT GTCCTGGAAC TCACTCTGTA GACCAGGCTA
  GCCTCAAACT CAGAGATCTG CCTGCCTCTG CCTCCTAAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147538555	ENSMUSSNP2631032	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46946048					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127545133 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	604 bp distal
Gm10765	predicted gene 10765	within coordinates
Mall	mal, T cell differentiation protein-like	1177 bp downstream
Tssr20034	transcription start site region 20034	792 bp downstream