rs46946918 SNP Detail

Summary

• ID
  rs46946918
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:21424942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTG AACCATAATT GTTTAATTGC
  M
  GCTTCATGAC TATAATTTTG CTACG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137298226	ENSMUSSNP4658909	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46946918					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:21424942 () rs orientation: forward

Symbol	Name	Function Class
Adam17	a disintegrin and metallopeptidase domain 17	1309 bp upstream
Cpgi4477	CpG island 4477	734 bp distal
Gm49586	predicted gene, 49586	595 bp downstream
Rr463712	regulatory region 463712	1502 bp distal
Rr463713	regulatory region 463713	1258 bp distal
Rr463714	regulatory region 463714	1377 bp distal
Rr463715	regulatory region 463715	217 bp distal
Rr463716	regulatory region 463716	1197 bp distal
Rr463717	regulatory region 463717	709 bp distal
Tssr112932	transcription start site region 112932	1162 bp downstream
Tssr112933	transcription start site region 112933	684 bp downstream
Tssr115856	transcription start site region 115856	1449 bp upstream
Tssr115857	transcription start site region 115857	1423 bp upstream
Tssr115858	transcription start site region 115858	1395 bp upstream
Tssr115859	transcription start site region 115859	1349 bp upstream
Tssr115860	transcription start site region 115860	1324 bp upstream