rs46947200 SNP Detail

Summary

• ID
  rs46947200
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129506296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGA CTCTCCCTTA GGCTGGGACT
  R
  TCCTCTGCAG GGTGAGGCAA TCTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147444287	ENSMUSSNP6276366	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321314246	CHEV_4_129289747	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46947200					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129506296 () rs orientation: forward

Symbol	Name	Function Class
Dcdc2b	doublecortin domain containing 2b	within coordinates
Rr600294	regulatory region 600294	1744 bp proximal
Tssr43540	transcription start site region 43540	1758 bp downstream