rs46956707 SNP Detail

Summary

• ID
  rs46956707
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:56962537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAATTTC TCCCTTCCCC
  TCCAGACAGG GTTTCTCTGT CAGCCCTGAC TGTCCTAGAA TTCACTCTGT AGCCTAGGTT
  GTGCTGGGAT TAAAGGCATA TGTCATTCCC CACCTCCCAA GGGATTCCAA CTTTTTTTTA
  AAAGATGTAT TTATTTATTA TATGTATGTG AGTACACTGT AGTTCTCTTC AGACACCGGA
  G
  GAAGGCACCA GATCTCATTA CAGACCACCA CATGGTTGCT GGGAATTGAA CTCAGGACCT
  CTAGAAGAGC AGTCATTGAT CTTAACCGCT GAGCCATCTT TCTAGCCCCT CATTTACTCT
  TGTAAAATGT GGGAGTCAGG GCTGGAAAGA TGGCTCCACC ATGTAAGGTG GAGGAGAAAA
  CAATCCTAAA ACACAAGTCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss136516052	ENSMUSSNP3952837	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs46956707					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:56962537 () rs orientation: forward

Symbol	Name	Function Class
Gm10658	predicted gene 10658	1644 bp downstream
Ptpn9	protein tyrosine phosphatase, non-receptor type 9	within coordinates
Rr195851	regulatory region 195851	864 bp proximal
Rr212037	regulatory region 212037	948 bp proximal