rs46957302 SNP Detail

Summary

• ID
  rs46957302
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69491832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTC TGTCGCTGAG TGACAACTCC
  R
  GTTCCCGAAC TAGAAAACTC CCGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132359140	ENSMUSSNP5800355	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46957302					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69491832 () rs orientation: forward

Symbol	Name	Function Class
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	within coordinates
Gm72066	predicted gene, 72066	within coordinates
Rr386229	regulatory region 386229	within coordinates
Rr450033	regulatory region 450033	1267 bp distal
Rr450034	regulatory region 450034	1396 bp distal
Rr450035	regulatory region 450035	344 bp distal
Tssr3544	transcription start site region 3544	302 bp upstream
Tssr102487	transcription start site region 102487	966 bp downstream
Tssr102488	transcription start site region 102488	157 bp upstream
Tssr102489	transcription start site region 102489	232 bp upstream
Tssr108712	transcription start site region 108712	988 bp upstream
Tssr108713	transcription start site region 108713	837 bp upstream
Tssr108714	transcription start site region 108714	769 bp upstream
Tssr108715	transcription start site region 108715	735 bp upstream
Tssr108716	transcription start site region 108716	431 bp upstream
Tssr108717	transcription start site region 108717	417 bp upstream
Tssr108718	transcription start site region 108718	353 bp upstream
Tssr108719	transcription start site region 108719	351 bp upstream
Tssr108720	transcription start site region 108720	335 bp upstream
Tssr108721	transcription start site region 108721	326 bp upstream
Tssr108722	transcription start site region 108722	248 bp upstream
Tssr108723	transcription start site region 108723	211 bp upstream
Tssr108724	transcription start site region 108724	165 bp upstream
Tssr108725	transcription start site region 108725	143 bp upstream
Tssr108726	transcription start site region 108726	41 bp upstream
Tssr108727	transcription start site region 108727	20 bp upstream
Tssr108728	transcription start site region 108728	13 bp downstream
Tssr108729	transcription start site region 108729	100 bp downstream
Tssr108730	transcription start site region 108730	132 bp downstream
Tssr108731	transcription start site region 108731	163 bp downstream
Tssr108732	transcription start site region 108732	224 bp downstream
Tssr108733	transcription start site region 108733	1446 bp downstream
Tssr108734	transcription start site region 108734	1737 bp downstream
Tssr108735	transcription start site region 108735	1804 bp downstream
Tssr108736	transcription start site region 108736	1842 bp downstream