rs46958179 SNP Detail

Summary

• ID
  rs46958179
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:135237830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGACCTT AGTTCTTATT
  CATAAACCAC AACTTTTTTT TTTGTTTAAT ATATAAAAGG ATGCAACAGG TTCCAATGTG
  GAGCCCACTG TGACCAATAA ACTTAGCTTG TAAAACAGGG GTAAGGGTAC TGCACTCATC
  CACAGCCATT CAAGCCTCCA AAGCCAGAGG CTTTAACAGT TGTGTCCTTC TTTAAAAGAA
  C
  GGCAGCATGG TGTGGGCCAT GTCTTGCCAC CACCTGCCTC CTATTGCTGC CTCATCCCCC
  TGTGTGTTGG CACTACAGTC CACACCGCCA CACCCAGCAC TTCAGTCACT CACAGTAACC
  TATCTTAAGT CTGTTCCAAG ATGAGCACTA TAAAAAGCAA ATAAACAGAA ATAAAGCAGA
  AGGAACTGTA ATCAACAATA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145530360	ENSMUSSNP5648470	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46958179					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135237830 () rs orientation: forward

Symbol	Name	Function Class
Rr419124	regulatory region 419124	1286 bp proximal
Timm17a	translocase of inner mitochondrial membrane 17a	Intron