rs46958827 SNP Detail

Summary

• ID
  rs46958827
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:98768772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGAAAAA GTATGATAAA
  CTCACACATC CTAGCTCAGG GCTACAGAGC AACTACACCA GTCACCAGAT TGCCTTGGCC
  CAGGACTCTT AAAAATAGTC AATAAATAAA TAAATAGTAA ACATAGTAAA AGAACAGGCT
  GTGTTGTGTC CTTGAGCTGT AGAGTTTGTC TAGTATGTGA GAGGATGAGC ATTAACAGGG
  K
  AGTGAAGGGA GAGAGGAGAG AGAGAGAGCC TAGAAAACAA TTTCAAGTCT CAGACACATA
  TAAATATAAC AAATGCTGAG AAATGCCACT TAGAAATCAA GCAGATCTAA GCTTATCATT
  TTCAACACAA ACAAAGGATT TAATTATGAA AGTTTTTCTC ATTCCGAATG GCATGTGCAG
  ATGAACTAAT GTTCTCAGAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136842155	ENSMUSSNP4428962	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46958827					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:98768772 () rs orientation: forward

Symbol	Name	Function Class
Gm33700	predicted gene, 33700	1492 bp upstream