rs46959832 SNP Detail

Summary

• ID
  rs46959832
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69017323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACC TATGCTGAGT AAGAAGATGA
  S
  AGCAGTGACT GCTCAAAGAC TGTGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52647681	NES15469371	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G		G		C	G	G	C		G
ss144529313	ENSMUSSNP1625423	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			G
ss324398729	CHEV_13_69008082	CHEVERUD	SCREENING_POP	f	SNP							G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs46959832					SNP	G	G	G	G	G	G	G	C	G	G	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52647681	NES15469371	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69017323 () rs orientation: forward

Symbol	Name	Function Class
Adcy2	adenylate cyclase 2	within coordinates
Rr277015	regulatory region 277015	523 bp distal
Rr280122	regulatory region 280122	1051 bp proximal