rs46965711 SNP Detail

Summary

• ID
  rs46965711
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8856871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTATCCTG CTTAAAGCTC
  CCATCATAAG TCAATCATGA AACCTCCATG GGCTCAGAAT AAGCAAAGCA ATCATGACAA
  AGAAGGGTTT CTAAAACACA GTACAAAGTG ACAGAAATTA AACTTGTATG GTATTGACTT
  AAGATTAGAC TTAGTGGGGA TAATGAGATA GCTTATCTGG TTAAAGAGCT TGCTGCTAAG
  Y
  CTGGCAACTT AGGCTCAACC CCTGGGAACC TCTAGGTGTA AGGAGAGCAC CAACAAATTG
  TTCTCTGATA TTGCACTCAC ACTATGGTAC ACACACATAC GCACACACAC ACACATACAC
  ATGTACACAC AAACATACAC TCACATATGC ATATACACAC ATATACATAC GTACATACAA
  ACACACACAT ATACACACTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146769100	ENSMUSSNP4487256	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss323246138	CHEV_10_8700925	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46965711					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8856871 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	1730 bp proximal