rs46967710 SNP Detail

Summary

• ID
  rs46967710
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135162295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTG CAGCTTTCCA CCCTGAGGCT
  Y
  CTGATTAAAC TTGACTTAAC ACGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147546897	ENSMUSSNP2771543	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss321352227	CHEV_4_134990899	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46967710					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135162295 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15072	CpG island 15072	431 bp distal
Gm69862	predicted gene, 69862	within coordinates
Rcan3	regulator of calcineurin 3	1141 bp upstream
Tssr39615	transcription start site region 39615	964 bp downstream
Tssr43991	transcription start site region 43991	1115 bp upstream