rs46969960 SNP Detail

Summary

• ID
  rs46969960
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32112114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCAGCTTC TTCCCCAGCT ACAGGAGCAG CTGTGGCCCT
  GACCTGGCCC AACTCTACCA GCAACGTTCT CTCCTCAGCC CTCCCAGTCC CCTCTGAGTT
  Y
  ACCCTACAGT CTATGTGTGC ACCATTTCCA TGTCCCTGTG AGGACCAAGG CTCTACTCCA
  CCAGTGATGC CCTGACTTAT GGGATGTGCT CACACAGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss134744600	ENSMUSSNP3054725	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320696668	CHEV_3_31956887	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46969960					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32112114 () rs orientation: forward

Symbol	Name	Function Class
Kcnmb2	potassium large conductance calcium-activated channel, subfamily M, beta member 2	within coordinates
Rr80380	regulatory region 80380	1688 bp proximal