rs46975833 SNP Detail

Summary

• ID
  rs46975833
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:45283381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GAAAAGGAGG AAGTGGGCTG GAGAGATGGC TTAGTGGTTA
  GGAGCATTGA CTGCTTTCCC AGAGGTCCTG AGTTTGATTC CCAGCAACCA CATGGTGTCT
  C
  ACAACCATCT GCAATAGGAT CTAATGCTCT CTTATGGTGT GTCTGAAGAT AGCAACAGTG
  TACTCATATA AATAAATAAA TCTTAAAGAA GAAAGAAAAA G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss132549739	ENSMUSSNP6946198	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46975833					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:45283381 () rs orientation: forward

Symbol	Name	Function Class
6330419E04Rik	RIKEN cDNA 6330419E04 gene	within coordinates
Cntnap2	contactin associated protein-like 2	within coordinates