rs46977120 SNP Detail

Summary

• ID
  rs46977120
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:22435666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTATTCCT AGCATTGAAG
  AAAAGTTAAA GACTATTTAA AAGACAAGAA ATTGGCTCTG TTTCCAGAGC ACTGGCTATG
  AGGCTGTGGG GCAGGGATGG TCTCTGTGAG AGCAAGCCGA CCAACCAGAG ACTTGTGTTG
  ACAGCAGAAA ATCAGCCTCA CTACCTGGAC CAGAAGCCCA ACGTTTATAG GCTGTCTTTT
  M
  TCTGTGAACA CTATGGTTAA ACTTGGAACC AGAGCCCTGA AGTTTATAGG CTATCTTCTA
  GCTGTGAACA CTATGGTTAC ACTTGGAATT GACCATGAGT CAACATTTCA AAAGTGAATA
  TGAAAACCCA ACTACAGAAG TGAAATTCAA AGGTGCCAAA CTGGTATGGG GGGGGGGGGA
  CACGGACTGA GGTTCTCACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63684860	NES17069317	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46977120					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63684860	NES17069317	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:22435666 () rs orientation: forward

Symbol	Name	Function Class
Dgkg	diacylglycerol kinase, gamma	within coordinates
Tssr4816	transcription start site region 4816	1079 bp downstream