rs46982562 SNP Detail

Summary

• ID
  rs46982562
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:66483571 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAAGCTAATG ATGCATTAAG CAACAGCATT ATAATATTAG
  AAGACTATCA TTGTAACTAT TTTTTAAAAA ATAGCAGTCA TAATACTATA AGCTGTTTTT
  R
  GAAAGAAGTA GGATATGAAT AGTTAAAATT AAAAAGTGTC TACCATCTTA ACAAATCTGT
  TAAGCTCTAG GCTTCCCTTT TCCACTTTTA TTTTTTCAGA A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss135256002	ENSMUSSNP2131759	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs46982562					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:66483571 () rs orientation: forward

Symbol	Name	Function Class
Rr665	regulatory region 665	within coordinates
Rr811	regulatory region 811	178 bp distal
Rr577850	regulatory region 577850	507 bp proximal