rs46992010 SNP Detail

Summary

• ID
  rs46992010
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78205409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAGCTGCT AAAAAGGTGC
  CAGACAGCCT CAGAATCCAC ATTGGTCCCT CCCCAGAGAG ATTAAAAACT TGGAACTATA
  CTTTTTGTTG TTGTTGTTGC TGTTGTTGTT AACTCAGGAG ATTCCTTGCC CGCCCTTCTC
  CCAATTCTGG CTTCTCTGTC TGACAGGAAG CTGTGGGAGT CCTTAGATCT GTAATCTCCT
  R
  AAACCAACCT GGGCCAGAAT TTACATCCTG ATCCCCAGCT GGCAGCTAAC TGTGTATCAT
  CTACTGGGCA GGTTTCCTAA CCTTTCTGAC TCTCAGTCTC TTCACTTCGG ATGGAGAAAA
  CTGTCTACTT CTTAGCAGTG TAGCTAGGTA GGGATGAGCA CATGGTGTGC CCAGAGGTCT
  CGGGATAACC ACCGATGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52381778	NES15271289	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46992010					SNP	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52381778	NES15271289	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78205409 () rs orientation: forward

Symbol	Name	Function Class
Gm56163	predicted gene, 56163	438 bp downstream