rs46993393 SNP Detail

Summary

• ID
  rs46993393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144832250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TGACTGCTGG TGTGCACCCT GTCCCTGTCT GACACCTGCA
  GTGGTGTGAC CGCTAGTGTG CACCCTGTCC CTGCCTGACA TCTGCAGTGG TGTGACTGCT
  R
  GTGTGCACCC TGTCCCTGCC TGACATCTGC AGTGGTGTGA CTGCTGGTGT GCACCCTGTC
  CCTGCTTCTT TCATCACTCT TTATGATCAC AGAAAGAAAG A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144622015	ENSMUSSNP3173787	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46993393					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144832250 () rs orientation: forward

Symbol	Name	Function Class
Mir7039	microRNA 7039	1292 bp downstream
Smurf1	SMAD specific E3 ubiquitin protein ligase 1	within coordinates