AGAGT GGGAGCCCAG GGAAAGCCAC M TTCAAAAGGA GTTTGGAAAA CATTA M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss60803582 | NES16473389 | PERLEGEN | MM_PANEL2 | f | SNP | C | A | C | C | A | A | C | C | A | C | C | A | C | C | C | ||
ss319993399 | CHEV_1_137686799 | CHEVERUD | SCREENING_POP | f | SNP | C | A | |||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
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rs47004868 | SNP | C | A | C | C | A | A | C | C | A | C | C | C | A | C | C | A | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60803582 | NES16473389 | PERLEGEN | MM_PANEL | f | SNP | A/C |
Location: Chr1:135717960 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr372093 | regulatory region 372093 | 1857 bp upstream | ||||||
Rr419276 | regulatory region 419276 | 1929 bp distal | ||||||
Rr419278 | regulatory region 419278 | 1072 bp distal | ||||||
Rr419279 | regulatory region 419279 | 1254 bp distal | ||||||
Rr419280 | regulatory region 419280 | within coordinates | ||||||
Rr419281 | regulatory region 419281 | 196 bp distal | ||||||
Tnni1 | troponin I, skeletal, slow 1 | Intron |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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