rs47010225 SNP Detail

Summary

• ID
  rs47010225
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45219052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACACTGTTG AAGTACAATA
  GCAATTTATA AACCCACAGT GATAATATGA GAGTTTTATA TTTGTCTGTC AGAACCTTCA
  ATTCCATAAG TTTAAATCAT TAAGGCAAAC ATTTAAATAT GATAATATAG AAAATTTTAA
  AATAAGCTTA TAGGTGTCTA TATTTAATTT GAATACACTA GATTTACATA GCCATTATAT
  K
  TTTATATATA TATGGGTATA TATTATATAT ATGTATACTA CTGAGTCATA AAATGTATAA
  TCTTTTCAAA AAACAAAATA TTTCCCCAAA CTGAACTTGA AATTGATCTT AAAAATTTAC
  TCTTTCTGAA CACTCACCAC AATATAGTAA AACCAAAAAT TCCCCAATTC CTTTTCAAAC
  TCCAATTATA GCTGAACTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148077904	ENSMUSSNP6899912	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss325166277	CHEV_16_45398802	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47010225					SNP	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45219052 () rs orientation: forward

Symbol	Name	Function Class
Cd200	CD200 molecule	within coordinates
D16Mit84	DNA segment, Chr 16, Massachusetts Institute of Technology 84	853 bp distal
Tssr141233	transcription start site region 141233	1544 bp upstream