rs47029316 SNP Detail

Summary

• ID
  rs47029316
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:99100547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTAATTG GTAGAGAATA
  TTTTGGCACT ACCTTCATGA GTACTATTTA TTTATCATCA TTAAAAATAC TGTCATTTAA
  CCAAAAAAGA TTTTGATCTG GAGATTGTAG TGAGCACATG TATTGTAGTT CCACAAATGG
  AATGCTTACA ACGCATGAGA TATTCTCGTT TTAAACATTG AAACTATTCT GCATATGGAA
  K
  GAGTAAATCT TGCACAGTCA AGCGTAAAAC GTAAACATGG TGTGATATTA CACAAACTTG
  TTTTTCTCAC CAACTGGGAT TTGATTTAAT GTGAGGAAAA AAGGCATAGA ACACAATAGA
  CCCAATGGGA AACCTGTCTA TGCATCCTCA TATGTGGGGG CTTGGCTCTG AACTATTTCT
  CATATCTCAT GTTTGGGAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss60654324	NES16257367	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs47029316					SNP	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60654324	NES16257367	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:99100547 () rs orientation: forward

Symbol	Name	Function Class
Rr382525	regulatory region 382525	56 bp downstream
Rr668405	regulatory region 668405	543 bp distal