rs47030027 SNP Detail

Summary

• ID
  rs47030027
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68259827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGAATGC CAAAGGTTAA
  TCTCTAGGAT TGAGTTTAGA CCTTTATCCA TCCACAGGTG ACAACAGTGA GACTGTCATC
  CAGTTCTGTG CCCCTTCCAA ATTCTTGTCT TCAATGTTCA ACATACATGT AGTGGCTATT
  CCTGGCTGTC AACTTGACTA TATTTGGAAT GAACTGCAAT CCAGAATTGG AAGGCTCTCC
  W
  GTGACCCTTA TCTGGAGGCT TGCAAATAGA AGTTTCTGAT CTGGATCTTG GTATGGAGAT
  CTTGAGGCAT AGTGGCAATG GATTCCAGAA GATTAAATCT CCGAGTTCAA GGTCATCTGG
  GATTAAAGGT GTGGTGGAAC ACACATTTAA TCTGGGCTAC CCCTTCTGCT GGAGACAATA
  TAATGACATT GGAAGAAGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146487525	ENSMUSSNP6750350	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47030027					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68259827 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	within coordinates
Rr376644	regulatory region 376644	1445 bp upstream