rs47031542 SNP Detail

Summary

• ID
  rs47031542
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:81113951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAAAGCCT TATTGCAGGC
  TCTTAAAAAT ATGCAGTAAA AACAAATTTC CACAGATCCA TTTTATCCCT CTTGCCCCTA
  AGGCTGAGAC CATCACAAAG TGAGTGGGGA GAATGTAAAA GCCAGAAATT GAGGCACGCG
  GGAAAGAAGC AGTGTCTTCC GGAATGGCAG GATTGCTACA CTCATGATGC CAGCTTTGTT
  R
  CCTGAACCCA ATCAAGACAG TCAACATTCC AGCATGAGAA GTGAGGAGGC CTCAGGAGCT
  GCCCAATCCA GCTGAGGCAC TATTGATAAT TGGTGGCTTC TGGAGGAGGA TGAATCTGTT
  TTCTTGGAGG ATATGGTCCT GGGTAGGTCA ACCATGCTCC ACATGCATGG ACATATGGGA
  GCATGAACTG AACTCTGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146076305	ENSMUSSNP2624155	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47031542					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:81113951 () rs orientation: forward

Symbol	Name	Function Class
Gm33596	predicted gene, 33596	709 bp downstream
Rr393005	regulatory region 393005	1212 bp downstream
Rr393006	regulatory region 393006	1054 bp upstream
Rr531544	regulatory region 531544	1562 bp proximal