rs47032185 SNP Detail

Summary

• ID
  rs47032185
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:65073203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAGTGGT CAGCTATATT
  GCTTGCAGAT TTGCCTAAGC CTGAGAATTT GGGCTTAGGA GTCTTGTTGC AGTTATTTAT
  AATCTTGTAA GAATTTGTTT AATAAAACAA TCTTTTGTTT CTACATTAAT CAACAATACA
  GCAGCCTGGT GTGAGCCATT CTTTCCAAGA ATGACAAATC CTAATGCCTT ATTCTTCTTA
  K
  GTTCTTTTAT GTTGTTCTTA CATCACCTAT ACATGCTATC ATCTTATCTT AGTCATCCTA
  GCTTGTGTTA TGGAGTTCTT ACTAGGGGCT TTGTATGTAT AGTCTCTTTT CTTGTATGTT
  ATAATTCTAA GAAATTCTAA ATATTTTGTA GAAGGAGTTC TTTGCTCTGA TTTACTGTCA
  TCTCTCCTAT CCTGCTGAGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss62845433	NES17373260	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs47032185					SNP	G	G	G	G	G	G	T	G	G	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62845433	NES17373260	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:65073203 () rs orientation: forward

Symbol	Name	Function Class
Dreh	down-regulated in hepatocellular carcinoma	903 bp upstream
Rr392835	regulatory region 392835	1252 bp downstream
Rr529706	regulatory region 529706	499 bp distal