rs47046309 SNP Detail

Summary

• ID
  rs47046309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84414555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCCCTGAG AATATTCCAG GAGCACAGGC AGGCATGAGG
  AGAGGCGAGG CTTCCCAGAA TTCTTCTCGG CCATGGTTGT CACATTACTA AAAGCAAGTC
  R
  CATGCTCATG GAGGAAAAGA ACTATACAAG GCATTTGTAT CAAAGAGTGG GGCTCGCTGG
  GGCCCCTAGA CAGCTCTCTA CCCCAAGACA CAGGGGACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146130463	ENSMUSSNP6339005	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47046309					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84414555 () rs orientation: forward

Symbol	Name	Function Class
Tssr146028	transcription start site region 146028	1055 bp upstream
Tssr149629	transcription start site region 149629	701 bp upstream