rs47047321 SNP Detail

Summary

• ID
  rs47047321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:21350338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTTCCGT AGTTCTGTTA
  TTCTCTAACA TGAAACCTAG TTTATTTTGC ATCTCTGCTA TGCTAACTAA GAAAGGGCAT
  ACCAATAATA GTAACAAAAA CATAAGCTTA GGAGAGTTAG GGTTTTTGTT TTGTTTTTTG
  TTTTTGCTTT CACATGAACT CTGAAAATTA GCAAAATTTA CAGAATTGTT TTAACCTGAA
  R
  GTGAAGAAGC AGTCTTCACC TTATTTACAT ACGTACCTGT TTATTTTTGG TGTTTTGAGA
  CGGGTGTTCA CTGTGCAGCC CCAGGCTGTG CTAGAATGTG CTCTGTATGA CTTTGTCATA
  TTGCTGTCTC TGCCTCCCCA GTGCCGGCCC CATAGACATA CCGGGCTCCA GATTTAATGT
  GTGTGGTGTT TGTTAGATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss63676831	NES17069188	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs47047321					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63676831	NES17069188	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:21350338 () rs orientation: forward

Symbol	Name	Function Class
D16Mit208	DNA Segment, Chr 16 Massachusetts Institute of Technology 208	992 bp distal
Vps8	VPS8 CORVET complex subunit	within coordinates